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Publications
Geolocation Prediction in Twitter Using Social Networks: A Critical Analysis and Review of Current Practice
Year: 2015 D. Jurgens T. Finethy J. McCorriston Y. T. Xu Conference Name: ICWSM
An Analysis of Exercising Behavior in Online Populations
Year: 2015 D. Jurgens J. McCorriston Conference Name: ICWSM
Organizations are Users Too: Characterizing and Detecting the Presence of Organizations on Twitter
Year: 2015 J. McCorriston D. Jurgens Conference Name: ICWSM
Goodreads vs. Amazon: The Effect of Decoupling Book Reviewing and Book Selling
Year: 2015 S. Dimitrov A. Piper Conference Name: ICWSM
Tackling the challenges of situational awareness extraction in Twitter with an adaptive approach
Year: 2015 H.M. Saleem Conference Name: HumTech
Social media for large studies of behavior
Journal: Science
Volume: 346 issue: 6213 Year: 2004 First Page: 1063 Last Page: 1064 J. Pfeffer
Novel Situational Information in Mass Emergencies: What does Twitter Provide?
Year: 2014 H.M. Saleem Y. Xu Conference Name: HumTech
Effects of Disaster Characteristics on Twitter event signatures
Year: 2014 H.M. Saleem Y. Xu Conference Name: HumTech
Control Profiles of Complex Networks
Journal: Science
Volume: 343 issue: 6177 Year: 2014 First Page: 1373 Last Page: 1376 J. Ruths
Gender Inference on Twitter in Non-English Contexts
Year: 2013 M. Ciot M. Sonderegger Conference Name: EMNLP
Political Orientation Inference on Twitter: It's Not Easy
Year: 2013 R. Cohen Conference Name: ICWSM
Identification of novel Endoplasmic Reticulum Stress Response Element regulated by XBP1
Journal: Journal of Biological Chemistry
Volume: 288 issue: 28 Year: 2013 First Page: 20378 Last Page: 20391 M. Misiewicz M. Dery B. Foveau J. Jodoin and A. C. LeBlanc
Robustness of Network Controllability under Edge Removal
Year: 2013 Conference Name: CompleNet
On the Contributions of Topology to Transcriptional Regulatory Network Robustness
Journal: BMC Bioinformatics
Volume: 13 issue: 318 Year: 2012 F.A. Zamal
What's in a name? Using first names as features for gender inference in Twitter
Journal: Symposium on Analyzing Microtext
Year: 2013 W. Liu
Flows of Research Manuscripts Among Scientific Journals Reveal Hidden Submission Patterns
Journal: Science
Volume: 338 issue: 6110 Year: 2012 First Page: 1065 Last Page: 1069 V. Calcagno E. Demoinet K. Gollner L. Guidi and D. de Mazancourt
Using social media to infer gender composition of computer populations
Year: 2012 W. Liu F.A. Zamal Conference Name: When the City Meets the Citizenship Workshop, ICWSM 2012
Reachability-based Robustness of Network Controllability under Node and Edge Attacks
Year: 2014 D. Parekh J. Ruths Conference Name: International Workshop on Complex Networks and their Applications, SITIS 2014
Twitter Users #CodeSwitch Hashtags! #MoltoImportante #wow
Year: 2014 Conference Name: First Workshop on Computational Approaches to Code Switching, EMNLP 2014
Homophily and Latent Attribute Inference: Inferring Attributes of Twitter Users from Neighbors
Year: 2012 F.A. Zamal W. Liu Conference Name: ICWSM 2012
Novel Graph-theoretic Analysis of Roads in Late Antiquity
Journal: Highways, Byways, and Road Systems in the Pre-Modern World
Year: 2012 M. Maas Publisher: Wiley-Black
The Effect of Mobile Platforms on Twitter Content Generation
Year: 2011 M. Perreault Conference Name: ICWSM 2011
A method for the automated, reliable retrieval of publication-citation records
Journal: PLoS ONE
Volume: 5 issue: 8 Year: 2010
Deriving predictive models of signaling network dynamics from qualitative experimental data
Year: 2010 L. Nakhleh Place: Stanford Conference Name: Computation Systems Bioinformatics (CSB 2010)
GS2: An efficiently computable measure of GO-based similarity of gene sets
Journal: Bioinformatics
Volume: 25 issue: 9 Year: 2009 First Page: 1178 Last Page: 1184 T. Ruths L. Nakhleh
Conference Report: International Research Symposium on Ankyloblepharon-Ectodermal Defects-Clift Lip and/or Palate (AEC) Syndrome
Journal: American Journal of Medical Genetics
Volume: 149 issue: 9 Year: 2009 First Page: 1885 Last Page: 1893 D. R. Roop, M. I. Koster, C. Missero, L. D. Attardi V. A. Lombillo, E. Ratoviski, M. Julapalli, V. P. Sybert, E. C. Siegfried, and A. F. Bree
PhyloNet: A Software Package for Analyzing and Reconstructing Reticulate Evolutionary Relationships
Journal: BMC Bioinformatics
Volume: 9 issue: 322 Year: 2008 C. Than L. Nakhleh
Rapidly exploring structural and dynamic properties of signaling networks using PathwayOracle
Journal: BMC Systems Biology
Volume: 2 issue: 76 Year: 2008 L. Nakhleh P.T. Ram
The Signaling Petri Net-Based Simulator: A Non-Parametric Strategy for Characterizing the Dynamics of Cell-Specific Signaling Networks
Journal: PLoS Computational Biology
Volume: 4 issue: 2 Year: 2008 M. Muller J.T. Tseng L. Nakhleh P.T. Ram
Kinome siRNA-phosphoproteomic screen identifies networks regulating AKT signaling
Journal: Oncogene
Volume: 30 Year: 2011 First Page: 4567 Last Page: 4577 Y. Lu, M. Muller, D. Smith, B. Dutta, K. Komurov S. Iadevaia, J-T. Tseng, S. Yu, Q. Yu L. Nakhleh, G. Balazsi, J. Donnelly, M. Schurdak S. Morgan-Lappe, S. Fesik, P.T. Ram and G.B. Mills
Confounding Factors in HGT Detection: Statistical Error, Coalescent Effects, and Multiple Solutions
Journal: Journal of Computational Biology
Volume: 14 issue: 4 Year: 2007 First Page: 517 Last Page: 535 C. Than H. Innan L. Nakhleh
De novo Signaling Pathway Predictions based on Protein-Protein Interaction, Targeted Therapy and Protein Microarray Analysis
Year: 2007 First Page: 61 Last Page: 72 J.T. Tseng L. Nakhleh P.T. Ram Conference Name: Proceedings of the RECOMB Satellite Workshop on Systems Biology and Proteomics. Lecture Nodes in Bioinformatics (LNBI #4463)
Identifiability Issues in Phylogeny-based Detection of Horizontal Gene Transfer
Year: 2006 First Page: 215 Last Page: 229 C. Than H. Innan L. Nakhleh Conference Name: Proceedings of the 4th RECOMB Comparative Genomics Satellite Workshop, (LNBI 4205)
Graph-theoretic Hypothesis Generation in Biological Signaling Networks
Journal: Journal of Computational Biology
Volume: 13 issue: 9 Year: 2006 First Page: 1546 Last Page: 1557 L. Nakhleh M.S. Iyengar S.A.G. Reddy P.T. Ram
Techniques for Assessing Phylogenetic Branch Support: A Performance Study
Year: 2006 First Page: 187 Last Page: 196 L. Nakhleh Conference Name: Proceedings of the 4th Asia-Pacific Bioinformatics Conference (APBC2006)
RECOMP: A Parsimony-based Method for Detecting Recombination
Year: 2006 First Page: 59 Last Page: 68 L. Nakhleh Conference Name: Proceedings of the 4th Asia-Pacific Bioinformatics Conference (APBC2006)
RIATA-HGT: A Fast and Accurate Heuristic for Reconstruction Horizontal Gene Transfer
Year: 2005 First Page: 84 Last Page: 93 L. Nakhleh L.S. Wang Conference Name: Proceedings of the 11th International Computing and Combinatorics Conference (LNCS 3595)
Recombination and Phylogeny: Effects and Detection
Journal: International Journal on Bioinformatics Research and Applications
Volume: 1 issue: 2 Year: 2005 First Page: 202 Last Page: 212 L. Nakhleh
Nanocell Logic Gates for Molecular Computing
Journal: IEE Transations on Nanotechnology
Volume: 1 issue: 2 Year: 2002 First Page: 100 Last Page: 109 J. M. Tour, W. L Van Zandt, C. P. Husband S. M. Husband, E. C. Libby, K. K. Young, L. S. Wilson P. D. Franzon, and D. P. Nackashi
Arbor3D: An Interactive Environment for Examining Phylogenetic and Taxonomic Trees in Multiple Dimensions
Journal: Bioinformatics
Volume: 16 issue: 11 Year: 2000 First Page: 1003 Last Page: 1009 E. Chen L. Ellis
A Virtual Genome Environment for the Visualization and Navigation of Genomic Data
Year: 2000 E. Chen L. Ellis Conference Name: Proceedings of the 4th International Immersive Projection Technology Workshop
Gene Trees, Species Trees, and Species Networks
Journal: Meta-analysis and Combining Information in Genetics
Year: 2005 L. Nakhleh H. Innan Publisher: CRC Press
Zombies at war
Journal: Armed Forces Journal
Year: 2008
Out from the Edges: Multi-site Videoconferencing as a Public Sphere in First Nations
Journal: Journal Community Informativs
Volume: 5 issue: 2 Year: 2010 S. O'Donnell
Everyone's Invited: A New Paradigm for Evaluation on Non-transferable Datasets
Journal: ICWSM Workshop on Standards and Practices in Large-Scale Social Media Research
Year: 2015 D. Jurgens T. Finethy C. Armstrong Conference Name: ICWSM
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